p-value: | 1e-3 |
log p-value: | -8.545e+00 |
Information Content per bp: | 1.945 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.36% |
Number of Background Sequences with motif | 4.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 40.7 +/- 24.5bp |
Average Position of motif in Background | 35.2 +/- 1.4bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGAATACGCT ATGMATATDC- |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGAATACGCT ATGAATATTC- |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TGAATACGCT- NTTNTATGAATGTGNNC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------TGAATACGCT NNTNTCATGAATGT--- |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGAATACGCT---- CATACAATACGAAATAA |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGAATACGCT-- NNNNTGAATTCANNNC |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGAATACGCT---- ATGAATATTCATGAG |
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DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGAATACGCT--- NWTGATTRGRTTAWN |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGAATACGCT-- CTACTTGGATACGGAAT |
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FOXF2/MA0030.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGAATACGCT-- NTTGTTTACGTTNN |
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