Information for 4-MCCWCWAGCCCTCRSS (Motif 12)

G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
Reverse Opposite:
A T G C A T C G A G T C A C T G C G T A A C T G A C T G C T A G A G T C A C G T C G A T A T C G G C A T A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 21.4bp
Average Position of motif in Background56.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS
----CNAGGCCT----
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS
----CTAGGCCT----
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MCCWCWAGCCCTCRSS
CCCCCTTGGGCCCC---
 A C G T G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:MCCWCWAGCCCTCRSS-
-----ATGCCCTGAGGC
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----MCCWCWAGCCCTCRSS
ATTTCCCAGVAKSCY-----
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS---
-----CAGGCCNNGGCCNN
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS---
-----NTGCCCTAGGGCAA
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS-
-----WTGSCCTSAGGS
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--MCCWCWAGCCCTCRSS
TGACCTTTTGACCTC---
 A C G T A C G T G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:MCCWCWAGCCCTCRSS---
-----NTGCCCANNGGTNA
 G T A C A G T C A G T C C G T A A T G C G C T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C C T A G T A G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A