Information for 17-CACCCAACAA (Motif 19)

A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G A C G T A C T G
p-value:1e-2
log p-value:-5.785e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 21.0bp
Average Position of motif in Background62.6 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACCCAACAA------
TCACCCATCAATAAACA
A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------CACCCAACAA
ANNTNCCCACCCANNAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACCCAACAA-
-----AACAAT
A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCCAACAA
ATCACCCCAC--
A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACCCAACAA---
---RNAACAATGG
A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACCCAACAA-
----NAACAAT
A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACCCAACAA----
AACACCAAAACAAAGGA
A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACCCAACAA---
AACAAACAACAAGAG
A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACCCAACAA
GGCCACACCCA----
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACCCAACAA
GCCACACCCA----
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T