Information for 11-CMTTCAKMTSCAC (Motif 8)

A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A T C G C G T A A C T G G T C A A C G T A C T G C G T A C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 11.2bp
Average Position of motif in Background53.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CMTTCAKMTSCAC
-------ATCCAC
 A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CMTTCAKMTSCAC
ACATTCATGACACG
 A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CMTTCAKMTSCAC
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CMTTCAKMTSCAC
ASTTTCACTTCC--
 A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CMTTCAKMTSCAC--
CTTTGTTATGCAAAT
 A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CMTTCAKMTSCAC--
YATGCATATRCATRT
 A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CMTTCAKMTSCAC
NNCATTCATTCATNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CMTTCAKMTSCAC--
CATTGTTATGCAAAT
 A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CMTTCAKMTSCAC
CTCATGAATATTCAT
 A C G T A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CMTTCAKMTSCAC
ASTTTCASTTYC--
 A C G T A G T C G T C A A C G T A C G T G T A C C G T A A C G T G T A C A C G T A T G C A G T C C G T A A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T