Information for 7-GYCMCGCCTY (Motif 4)

C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C
Reverse Opposite:
T C A G C T G A T C A G C T A G G A T C A C T G C A T G A T C G C T A G G A T C
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.591
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif9.40%
Number of Background Sequences with motif1750.3
Percentage of Background Sequences with motif3.84%
Average Position of motif in Targets48.5 +/- 28.1bp
Average Position of motif in Background48.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---GYCMCGCCTY--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GYCMCGCCTY-----
GCCCCGCCCCCTCCC
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GYCMCGCCTY--
NAGCCCCGCCCCCN
 A C G T A C G T C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GYCMCGCCTY
GCCMCRCCCH
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GYCMCGCCTY---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GYCMCGCCTY-
GCCACGCCCCC
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GYCMCGCCTY-
GGCCCCGCCCCC
 A C G T C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GYCMCGCCTY-
GCCCCGCCCCC
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GYCMCGCCTY
GCCCCACCCA
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GYCMCGCCTY-
GCCACGCCCCC
 C T A G G A T C T A G C G T A C T G A C C T A G G A T C A G T C A G C T A G T C A C G T
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C