Information for 17-CATCTGCCGCGTA (Motif 18)

A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
Reverse Opposite:
C A G T T G C A A T G C A C T G A T G C C T A G A C T G A G T C G T C A A C T G T C G A A C G T A C T G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.6 +/- 27.4bp
Average Position of motif in Background43.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CATCTGCCGCGTA
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCCGCGTA
NVCAGCTGBBNN---
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CATCTGCCGCGTA
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCGCGTA
TGCAGCTGTCCCT--
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCCGCGTA
GCCAGCTGBTNB---
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CATCTGCCGCGTA
CGACCAACTGCCGTG--
 A C G T A C G T A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCGCGTA
GCCATCTGTT-----
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCGCGTA
ACCATCTGTT-----
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCCGCGTA
AGCAGCTGCTNN---
 A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CATCTGCCGCGTA
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A G T C A C G T A C T G A G T C A G T C A T C G A G T C A T C G A C G T G C T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T