Information for 13-CGCACCGTGGACACCT (Motif 27)

A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C T G A G C T A G T C A G T C C T G A A G T C A C T G A C T G A C G T A C T G A T G C A C T G
p-value:1e-6
log p-value:-1.398e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 29.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCACCGTGGACACCT--
TCAGCACCATGGACAGCTCC
 A C G T A C G T A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCACCGTGGACACCT--
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGCACCGTGGACACCT----
----NNGGCGACACCTCNNN
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CGCACCGTGGACACCT
--------TGACACCT
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CGCACCGTGGACACCT---
---------TACACCTGTC
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CGCACCGTGGACACCT---
---------NNCACCTGNN
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CGCACCGTGGACACCT---
----------NCACCTGTN
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CGCACCGTGGACACCT
--------TCACACCT
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CGCACCGTGGACACCT---
---------AACACCTGCT
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CGCACCGTGGACACCT----
--------SNGCACCTGCHS
 A G T C A T C G A G T C C G T A A G T C A G T C C T A G A G C T C T A G A C T G C T G A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C