Information for 17-CACAGACATT (Motif 26)

A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.535e+01
Information Content per bp:1.926
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif79.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets68.0 +/- 27.1bp
Average Position of motif in Background56.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CACAGACATT---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACAGACATT-
-CCAGACRSVB
 A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGACATT
-CCAGACAG-
 A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACAGACATT
-BCAGACWA-
 A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACAGACATT
AAACCACAGAN---
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACAGACATT
CACAGN----
 A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CACAGACATT
NWAACCACADNN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACAGACATT-
AAACAAACATTC
 A C G T A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACAGACATT
--TTGACAG-
 A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

SOX21/MA0866.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACAGACATT---
AACACTACCATTGTT
 A C G T A C G T A G T C C G T A G T A C C G T A A C T G C G T A G T A C C G T A A C G T C G A T A C G T A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T