Information for 11-AGTGTACTTTGTACTT (Motif 24)

C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.666e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 33.5bp
Average Position of motif in Background47.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGTGTACTTTGTACTT--
--TGGACTTTGNNCTNTG
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGTGTACTTTGTACTT-
--TGGACTTTGNNCTCN
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTACTTTGTACTT
NNATTGGACTTTNGNN--
 A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGTACTTTGTACTT
ATTGGACTTTGACCCC
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTACTTTGTACTT
AGGVNCCTTTGT----
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTGTACTTTGTACTT--
-NNNTCCTTTGTTCTNNN
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGTGTACTTTGTACTT
------CTTTGT----
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTGTACTTTGTACTT--
-TNNTCCTTTGTTCTNNT
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGTGTACTTTGTACTT
-----YCTTTGTTCC-
 C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGTGTACTTTGTACTT
ACTCCAAGTACTTGGAA---
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T