Information for 9-GCCRACATCCTGCTGS (Motif 19)

A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
Reverse Opposite:
A T C G A G T C C T G A A C T G A G T C G C T A C T A G C T A G C G T A C G A T A C T G G A C T A G T C C T A G A C T G A G T C
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.777
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 28.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCCRACATCCTGCTGS
----ACATCCTGNT--
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCRACATCCTGCTGS--
---GGCCYCCTGCTGDGH
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS-
-----CCCCCTGCTGTG
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS
---CACTTCCTGT---
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS
----ACTTCCGGTT--
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS
----ACTTCCGGTN--
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS----
-----TNTCCTGCTGTGNNG
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS
-ACCACATCCTGT---
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS----
-----TCNCCTGCTGNGNNN
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCCRACATCCTGCTGS----
-----NNTCCTGCTGTGNNN
 A C T G A G T C G A T C T C A G C G T A A G T C C G T A C G A T A G T C A G T C C A G T A C T G A G T C A G C T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C