Information for 17-TGCTGMCAGTCCC (Motif 17)

A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A C G T A T C G A C T G A G T C C G T A A C T G A T G C C G T A
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 22.2bp
Average Position of motif in Background30.0 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGCTGMCAGTCCC
GGTGYTGACAGS---
 A C G T A C G T A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTGMCAGTCCC
-SCTGTCAVTCAV
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTGMCAGTCCC
-NCTGTCAATCAN
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCTGMCAGTCCC
-VBTGWCAGCB--
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCTGMCAGTCCC
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCTGMCAGTCCC
AAAATGCTGACT-----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTGMCAGTCCC
GSCTGTCACTCA-
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCTGMCAGTCCC
-RHTGWCAR----
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCTGMCAGTCCC
TGCTGACTCA---
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCTGMCAGTCCC
--TTGACAG----
 A C G T A T C G A G T C C G A T A C T G G T A C A T G C C G T A A C T G A C G T A G T C A G T C A G T C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T