Information for 16-CCTRCARAGKGWG (Motif 15)

A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
Reverse Opposite:
A G T C C G A T A G T C G T A C G T A C A C G T A G T C A C G T A C T G A G C T C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.831
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.8 +/- 24.9bp
Average Position of motif in Background66.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTRCARAGKGWG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTRCARAGKGWG
--AACAKATGGY-
 A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTRCARAGKGWG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTRCARAGKGWG
--AACAGATGGT-
 A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTRCARAGKGWG
--AACAGATGGC-
 A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCTRCARAGKGWG
---ACATATGG--
 A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTRCARAGKGWG-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTRCARAGKGWG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTRCARAGKGWG-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTRCARAGKGWG
TTTCCTAGAAAGCA--
 A C G T A C G T A C G T A G T C A G T C C G A T C T G A A G T C C G T A T C A G C G T A A C T G A C T G A C T G G C T A A C T G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T