Information for 1-NGSCGCCAYCTGGTGG (Motif 1)

G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
Reverse Opposite:
A G T C A G T C C G T A A T G C G T A C C G T A A C T G T C A G A C G T A C T G A T C G G T A C T C A G A T C G G A T C C T G A
p-value:1e-110
log p-value:-2.554e+02
Information Content per bp:1.678
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.57%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets54.3 +/- 18.6bp
Average Position of motif in Background57.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---NGSCGCCAYCTGGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NGSCGCCAYCTGGTGG---
TAGCGCCCCCTGGTGGCCA
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-NGSCGCCAYCTGGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:NGSCGCCAYCTGGTGG
----GCCATCTGTT--
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:NGSCGCCAYCTGGTGG
-GCCGCCATCTTG---
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:NGSCGCCAYCTGGTGG--
---GGCCYCCTGCTGDGH
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:NGSCGCCAYCTGGTGG-
-----CCCCCTGCTGTG
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--NGSCGCCAYCTGGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:NGSCGCCAYCTGGTGG
-GCNGCCATCTTG---
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:NGSCGCCAYCTGGTGG
----ACCATCTGTT--
 G A C T C T A G A T G C A G T C C A T G A T G C A G T C G T C A A G T C G T A C C G A T C A T G A T C G C G A T A C T G T C A G
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T