Information for 5-CGCATGCBCW (Motif 5)

G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
Reverse Opposite:
G C T A A C T G T C A G C T A G A G T C C G T A G A C T A C T G A G T C A C T G
p-value:1e-14
log p-value:-3.316e+01
Information Content per bp:1.751
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif508.4
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets48.8 +/- 24.8bp
Average Position of motif in Background50.0 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCBCW-
GCGCATGCGCAC
 A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCBCW-
GCGCATGCGCAG
 A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCBCW
GCGCCTGCGCA
 A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCBCW
SNGCACCTGCHS-
 A C G T A C G T A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCATGCBCW
NNCGCGTGNN--
 A C G T A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGCATGCBCW--
---ATGCCCACC
 G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCATGCBCW
GGTCACATGAC--
 A C G T A C G T A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCATGCBCW
AAGCACATGG---
 A C G T A C G T A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCATGCBCW-----
-ACATGCCCGGGCAT
 G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCATGCBCW
GTCACATGAY--
 A C G T A C G T G T A C T C A G A G T C C T G A C G A T A C T G A G T C A G T C A G T C C G A T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T