Information for 11-GAAAAAAGAGACC (Motif 9)

A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
Reverse Opposite:
T A C G A C T G A G C T G T A C C A G T A G T C G A C T A C G T A C G T A C G T A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.014e+01
Information Content per bp:1.773
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.3 +/- 24.5bp
Average Position of motif in Background26.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAAAAAGAGACC
GWAAYHTGAKMC-
 A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAAAAAAGAGACC
GWAAYHTGABMC-
 A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GAAAAAAGAGACC
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAAAAGAGACC-
GAGAACCGAAACTG
 A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAAAGAGACC
GGAACAAAGR----
 A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAAAAAGAGACC--
GGAAANTGAAACTNA
 A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAAAAAAGAGACC
AAATAAGAAAAAAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAAAGAGACC
AATGGAAAAT-------
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAAAGAGACC
TGGAAAA--------
 A C G T A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAAAGAGACC
NATGGAAAAN-------
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A T G C A G T C A C T G A A C T G G C T A A C T G C T G A G T A C A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T