Information for 8-GARACTAAARARG (Motif 7)

C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
Reverse Opposite:
A G T C A G T C A C G T G A C T A G C T A C G T A G C T C G T A A T C G A C G T A G C T A G C T A G T C
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.4 +/- 20.7bp
Average Position of motif in Background65.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GARACTAAARARG
--AAATAAACA--
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GARACTAAARARG
-AAAGTAAACA--
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GARACTAAARARG
-TATGTAAACANG
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXF2/MA0030.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GARACTAAARARG
CAAACGTAAACAAT
 A C G T C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GARACTAAARARG
-AAAGTAAACA--
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GARACTAAARARG
-WWTRTAAACAVG
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GARACTAAARARG---
AAAAAGTAAACAAACAC
 A C G T C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GARACTAAARARG---
AAAAAGTAAACAAACAC
 A C G T C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GARACTAAARARG--
CAAAGTAAACANNNN
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GARACTAAARARG
--AAGTAAACAAA
 C T A G C T G A C T G A T C G A A T G C C G A T C T G A C G T A C T G A C T G A C G T A T C A G C T A G
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A