Information for 16-TGATTGGTCA (Motif 25)

A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A
Reverse Opposite:
C A G T T A C G G T C A T A G C G T A C G C T A C T G A C A G T T G A C T G C A
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.678
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.98%
Number of Background Sequences with motif738.6
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets47.0 +/- 30.2bp
Average Position of motif in Background50.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGTCA----
CTGATTGGTCNATTT
 A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGATTGGTCA--
TGATTGGCTANN
 A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------TGATTGGTCA-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGTCA
TTGATTGN---
 A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGTCA
CCGATTGGCT-
 A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGGTCA
TTTGATTGATGN
 A C G T A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TGATTGGTCA
----AGGTCA
 A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGTCA-----
NNNNTTGGGCACNNCN
 A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGTCA----
NNAATTAGTCACGGT
 A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PH0107.1_Msx2/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTGGTCA--
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A G A C T C G A T A C T G A T C G C A G T A T G C G T C A A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C