Information for 15-GGAAATCCCC (Motif 24)

A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
Reverse Opposite:
A C T G C T A G C T A G C T A G T G C A C G A T A C G T A G C T A G T C A G T C
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.845
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif85.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets41.7 +/- 25.1bp
Average Position of motif in Background52.5 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCCC
GGAAATCCCC
 A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATCCCC-
GGGAAATCCCCN
 A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCCC
GGAAATTCCC
 A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCCC
GGAAANCCCC
 A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GGAAATCCCC
GGAAATTCCC
 A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGAAATCCCC
GGGGGAATCCCC
 A C G T A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATCCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGAAATCCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATCCCC--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATCCCC
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G C T A G C T G A C G T A C G T A A C G T A G T C A G T C G A T C G T A C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T