Information for 2-GGGGCGGGGCYKC (Motif 2)

T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
Reverse Opposite:
A T C G G T A C T C G A A C T G A G T C A G T C A T G C T A G C A C T G A T G C A T G C G T A C A G T C
p-value:1e-19
log p-value:-4.397e+01
Information Content per bp:1.674
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif9.42%
Number of Background Sequences with motif1360.3
Percentage of Background Sequences with motif3.05%
Average Position of motif in Targets46.4 +/- 23.8bp
Average Position of motif in Background49.7 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCYKC
GGGGGCGGGGCC--
 A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCYKC
AGGGGGCGGGGCTG-
 A C G T A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCYKC
GGGGGCGGGGC---
 A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGCYKC
GGGNGGGGGCGGGGC---
 A C G T A C G T A C G T A C G T A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGGGCYKC
GGGGNGGGGC---
 T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCYKC
RGKGGGCGGAGC---
 A C G T A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGCYKC
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGCYKC
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGGCGGGGCYKC
MKGGGYGTGGCC--
 A C G T T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGGGCGGGGCYKC
TGGGTGGGGC---
 T C A G C A T G T A C G A T C G G T A C A T C G T A C G T C A G T C A G T G A C A G C T C A T G T A G C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T