Information for 13-YCSTCCTTWARAC (Motif 11)

A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T A C G T C G A T C G T A C T G A A C T G A C T G C G T A A T C G A C T G C T A G
p-value:1e-12
log p-value:-2.987e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 21.0bp
Average Position of motif in Background26.3 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---YCSTCCTTWARAC----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:YCSTCCTTWARAC---
-TATCATTAGAACGCT
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C A C G T A C G T A C G T
A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YCSTCCTTWARAC
--GTCGTAAAAT-
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YCSTCCTTWARAC
--NGCAATTAAA-
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:YCSTCCTTWARAC
--GTCGTAAAAA-
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:YCSTCCTTWARAC----
--AACCGTTAAACGGTC
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-YCSTCCTTWARAC--
GACNTCATTAATAANN
 A C G T A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:YCSTCCTTWARAC
--GTAATTAA---
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YCSTCCTTWARAC--
---CCTTTTATAGNC
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:YCSTCCTTWARAC
-GCTCGTAAAAA-
 A G T C A G T C A T G C A C G T A G T C G T A C A G C T A C G T G C T A C G T A C T G A C G T A A G T C
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T