Information for 13-AGCGCTGTGTGCA (Motif 23)

G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C C G T A A G T C G C T A T G A C C T G A A T C G A G T C A C T G G T A C C G A T
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.6 +/- 28.4bp
Average Position of motif in Background63.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA--
-GTGCCGTGTGCAAA
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGCGCTGTGTGCA----
-GGGCCGTGTGCAAAAA
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA---
NNNNTTGTGTGCTTNN
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA---
NNGCGTGTGTGCNGCN
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA------
--NTNTATGTGCACATNNN
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA-------
---NSTGTTTRCWCAGBNNN
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGCGCTGTGTGCA
-----TGCGTG--
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA------
--NNGTATGTGCACATNNN
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA-
---CTTGAGTGGCT
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCGCTGTGTGCA-
----TTAAGTGCTT
 G C T A A C T G G T A C A C T G A T G C A G C T A C T G C A G T A C T G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T