Information for 3-CGACTGTGAATTT (Motif 4)

A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
Reverse Opposite:
C T G A G C T A C G T A A C G T A C G T A G T C C G T A A T G C G T C A C T A G A G C T A G T C A T C G
p-value:1e-18
log p-value:-4.156e+01
Information Content per bp:1.825
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 28.4bp
Average Position of motif in Background77.0 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGACTGTGAATTT--
----TGTGGATTNNN
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGACTGTGAATTT-
--NNTGTGGATTSS
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGACTGTGAATTT
-TGCTGTGATTT-
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGACTGTGAATTT
NNTNTCATGAATGT
 A C G T A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGACTGTGAATTT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGACTGTGAATTT-----
--GGACTGAATTCATGCC
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGACTGTGAATTT
---ATTTGAATT-
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGACTGTGAATTT
--GCAGTGATTT-
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGACTGTGAATTT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGACTGTGAATTT
---CNGTGATTTN
 A T G C A C T G C T G A A G T C A C G T A T C G A C G T A C T G C G T A G T C A A C G T C A G T A G C T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G