Information for 11-MCACTCAGCDGGA (Motif 16)

G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A
Reverse Opposite:
C G A T A T G C A G T C G T A C A C T G A G T C C G A T A C T G C G T A A C T G C G A T A C T G C A T G
p-value:1e-12
log p-value:-2.854e+01
Information Content per bp:1.793
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.3 +/- 26.4bp
Average Position of motif in Background47.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:MCACTCAGCDGGA
--DCTCAGCAGG-
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:MCACTCAGCDGGA--
CCACACAGCAGGAGA
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:MCACTCAGCDGGA----
--DCHCAGCAGGRGGCC
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:MCACTCAGCDGGA--
CCACACAGCAGGAGA
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:MCACTCAGCDGGA--
---CACAGCAGGGGG
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MCACTCAGCDGGA--
GAGCACAGCAGGACA
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:MCACTCAGCDGGA
--NAHCAGCTGD-
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--MCACTCAGCDGGA
AGCCACTCAAG----
 A C G T A C G T G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:MCACTCAGCDGGA
-----CAGCTGNT
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:MCACTCAGCDGGA-
---GTCAGCANNTN
 G T A C A G T C G C T A G T A C A C G T A G T C C G T A A C T G A G T C C A T G A C T G T A C G C G T A A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T