Information for 23-AACGAAKGKA (Motif 30)

G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
Reverse Opposite:
A C G T T G A C A G T C G T A C A C G T A G C T A G T C A C T G G A C T A C G T
p-value:1e-5
log p-value:-1.334e+01
Information Content per bp:1.741
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif261.0
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets43.8 +/- 30.9bp
Average Position of motif in Background50.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AACGAAKGKA
AGAAACGAAAGT-
 A C G T A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AACGAAKGKA
NTGGAATGTG
 G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AACGAAKGKA
AACAAAGG--
 G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACGAAKGKA------
GGAAGGAAGGAAGGAAGG
 A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACGAAKGKA----
ACTATGAATGAATGAT
 A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACGAAKGKA
NTGGAATGTN
 G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AACGAAKGKA
AAAACAAAGG--
 A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AACGAAKGKA
GAAAGTGAAAGT-
 A C G T A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AACGAAKGKA
-TGGAATGT-
 G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AACGAAKGKA-
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T G A C C T A G T C G A G T C A C A T G A C T G A C T G C G T A A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T