Information for 6-CGAGTGTCACTCA (Motif 7)

A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C T G A C G T A C T G T C G A A T G C C G T A A T G C C A G T G T A C C T A G
p-value:1e-15
log p-value:-3.657e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 21.8bp
Average Position of motif in Background39.8 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CGAGTGTCACTCA-
--SCTGTCAVTCAV
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGAGTGTCACTCA
-GSCTGTCACTCA
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CGAGTGTCACTCA-
--NCTGTCAATCAN
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGAGTGTCACTCA--
----AGCCACTCAAG
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGAGTGTCACTCA-
----MRSCACTYAA
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGAGTGTCACTCA-
----AASCACTCAA
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGAGTGTCACTCA--
----GGTGACTCATG
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CGAGTGTCACTCA
------TGACTCA
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGAGTGTCACTCA--
----TGTGACTCATT
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGAGTGTCACTCA--
----GGTGACTCATC
 A G T C A C T G G C T A A T C G C G A T A T C G A C G T G T A C C G T A A G T C A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C