Information for 5-GGTCAAGGGTGAG (Motif 6)

A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A G T A C A G T C A G T C A G C T A C G T A C T G C G T A A G T C G T A C
p-value:1e-15
log p-value:-3.657e+01
Information Content per bp:1.929
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 33.1bp
Average Position of motif in Background44.9 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGTGAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

RXRG/MA0856.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGTGAG
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGTGAG
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGTGAG
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGTGAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTCAAGGGTGAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTCAAGGGTGAG-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTCAAGGGTGAG
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCAAGGGTGAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAAGGGTGAG
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T G T A C C G T A C T G A A C T G A C T G A C T G A C G T A C T G C G T A C T A G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T