Information for 21-CTCCTACCTC (Motif 28)

A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
Reverse Opposite:
A C T G T G C A C T A G A C T G C G A T G C T A A T C G C T A G C G T A C T A G
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.854
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif130.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets40.3 +/- 30.0bp
Average Position of motif in Background45.9 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACCTC
NNACTTACCTN
 A C G T A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCTACCTC
-TCACACCT-
 A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTACCTC--------
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCCTACCTC
-TCACACCT-
 A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCCTACCTC
TTCACACCTT
 A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTACCTC
NTTTTCACACCTT
 A C G T A C G T A C G T A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACCTC
TTTCACACCT-
 A C G T A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCTACCTC
-TCACACCT-
 A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACCTC
CTTCACACCTA
 A C G T A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCTACCTC
-TCACACCT-
 A G T C C G A T A G T C A T G C C G A T C G T A G T A C A G T C A C G T G T A C
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T