Information for 17-AAGCGTGTGA (Motif 25)

C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 29.8bp
Average Position of motif in Background61.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA
-TGCGTG---
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAGCGTGTGA
--AGGTGTGA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGCGTGTGA-----
GAAAAGGTGTGAAAATT
 A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA----
-AAGGTGTGAAAAT
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA-
-AAGGTGTGAA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA--
-AAGGTGTGAAA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA-
-RTCATGTGAC
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGTGA
AAGCTTG---
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGCGTGTGA
--AGGTGTGA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGCGTGTGA-
-AAGGTGTKAA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A