Information for 16-CGCACGGATG (Motif 24)

A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
Reverse Opposite:
A T G C C G T A G A C T A G T C A G T C A C T G G C A T A C T G A T G C A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.855
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.0 +/- 20.0bp
Average Position of motif in Background53.7 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCACGGATG
-GCACGTAY-
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCACGGATG
BGCACGTA--
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCACGGATG
TBGCACGCAA-
 A C G T A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGCACGGATG
-GCACGTNC-
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

ETV5/MA0765.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGCACGGATG--
--ACCGGAAGTG
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCACGGATG-
-GCACGTACCC
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCACGGATG--
-ACCCGGATGTA
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G A C G T A C G T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CGCACGGATG
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCACGGATG
--CACGCA--
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCACGGATG
GGCACGCGTC
 A G T C A T C G A G T C C G T A A G T C A C T G A C T G C G T A G C A T A T C G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C