Information for 3-GAGGCCCCGCCCM (Motif 3)

A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A
Reverse Opposite:
C A G T T C A G A C T G A C T G A G T C A C T G A C T G C T A G T C A G G T A C T A G C G C A T A T G C
p-value:1e-27
log p-value:-6.339e+01
Information Content per bp:1.684
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif12.33%
Number of Background Sequences with motif1296.2
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets49.6 +/- 29.1bp
Average Position of motif in Background48.2 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GAGGCCCCGCCCM-
--GGCCCCGCCCCC
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GAGGCCCCGCCCM--
-NAGCCCCGCCCCCN
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T A C G T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:GAGGCCCCGCCCM--
---GCTCCGCCCMCY
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.83
Offset:3
Orientation:forward strand
Alignment:GAGGCCCCGCCCM-----
---GCCCCGCCCCCTCCC
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.83
Offset:3
Orientation:forward strand
Alignment:GAGGCCCCGCCCM
---GCCCCGCCCC
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.83
Offset:3
Orientation:forward strand
Alignment:GAGGCCCCGCCCM-
---GCCCCGCCCCC
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GAGGCCCCGCCCM---
-NRGCCCCRCCCHBNN
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GAGGCCCCGCCCM
---GCCCCACCCA
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GAGGCCCCGCCCM
---GCCMCRCCCH
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A
A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GAGGCCCCGCCCM--
---GCCMCGCCCMCY
 A T C G C G T A A T C G A C T G A G T C A G T C T G A C A G T C A C T G A G T C A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C