Information for 19-GACCCTGACC (Motif 27)

A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A C T G A C T G C G A T A G T C
p-value:1e-4
log p-value:-9.518e+00
Information Content per bp:1.926
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.6 +/- 25.1bp
Average Position of motif in Background45.0 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACC-
TGACCTTGACCT
 A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACC-
TGACCTTGACCT
 A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACC-
-----TGACCT
 A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACC--
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACC
NATGACCTTGA--
 A C G T A C G T A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACC
TGACCTTGAV-
 A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACCCTGACC
ATGACCTTGAA-
 A C G T A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GACCCTGACC---
-----TGACCYCT
 A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGACC-
NAGGTCANTGACCT
 A C G T A C G T A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGACC
TGACCTTGAN-
 A C G T A C T G C G T A A G T C G T A C A G T C A C G T A C T G C G T A G T A C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T