Information for 19-TCATGAATATTCA (Motif 26)

A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A A G C T C T A G G T C A
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.2 +/- 24.2bp
Average Position of motif in Background59.0 +/- 50.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TCATGAATATTCA-
CTCATGAATATTCAT
 A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TCATGAATATTCA
--ATGAATATTC-
 A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:forward strand
Alignment:TCATGAATATTCA
--ATGMATATDC-
 A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TCATGAATATTCA---
-YATGCATATRCATRT
 A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCATGAATATTCA
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCATGAATATTCA-
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCATGAATATTCA-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCATGAATATTCA
ATATGCAAATNNN
 A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATGAATATTCA
NNTNNCAATATTAG
 A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATGAATATTCA
NNTNNCAATATTAG
 A C G T A C G T G A T C C T G A A C G T A T C G G T C A C G T A A C G T C G T A A C G T A C G T A T G C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G