Information for 18-GGTCAGTTACACA (Motif 21)

A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G A C G T G T C A C G T A A G T C A G C T C T A G C T G A A G T C A G T C
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.9 +/- 20.4bp
Average Position of motif in Background52.8 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGTTACACA
NAGGTCANTGACCT-
 A C G T A C G T A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTCAGTTACACA
-GGCVGTTR----
 A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTTACACA
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGTTACACA
AGGTCA--------
 A C G T A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGTCAGTTACACA
------TGACTCA
 A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTCAGTTACACA
BRRCVGTTDN---
 A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGTTACACA
CAGGTAAGTAT----
 A C G T A C G T A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTTACACA
AGRGGTCA--------
 A C G T A C G T A C G T A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTCAGTTACACA
TGGCAGTTGN---
 A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTCAGTTACACA
TGGCAGTTGG---
 A C T G A C T G A G C T A G T C C T G A A C T G A C G T A C G T C G T A A G T C G C T A A G T C C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T