Information for 2-GGGGGCGGGGCCD (Motif 2)

A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
Reverse Opposite:
G C A T C T A G T C A G G A T C G A T C T G A C A G T C C A T G A G T C A G T C A G T C G T A C T A G C
p-value:1e-26
log p-value:-6.177e+01
Information Content per bp:1.661
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif12.39%
Number of Background Sequences with motif1633.8
Percentage of Background Sequences with motif3.70%
Average Position of motif in Targets46.3 +/- 26.2bp
Average Position of motif in Background48.6 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGGGGCGGGGCCD
GGGGGCGGGGCC-
 A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGGGGCCD
AGGGGGCGGGGCTG
 A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GGGGGCGGGGCCD
GGGGGCGGGGC--
 A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGCGGGGCCD-
NNAGGGGCGGGGTNNA
 A C G T A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGGGGCCD
RGKGGGCGGAGC--
 A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGCGGGGCCD
NNVDGGGYGGGGCYN
 A C G T A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:GGGGGCGGGGCCD
-GGGGNGGGGC--
 A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGCGGGGCCD
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGGGGCCD
RGKGGGCGKGGC--
 A C G T A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GGGGGCGGGGCCD
-TGGGTGGGGC--
 A T C G C A T G T C A G A C T G C T A G G A T C A C T G A C T G C T A G C A T G A G T C G A T C C G T A
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T