Information for 6-GGCCTCTCKCTSCCCT (Motif 7)

A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
Reverse Opposite:
G C T A A C T G A C T G C T A G A T C G C T G A C T A G G T C A C T A G C G T A C T A G G T C A A C T G T A C G T A G C A T G C
p-value:1e-12
log p-value:-2.946e+01
Information Content per bp:1.738
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.6 +/- 23.6bp
Average Position of motif in Background59.4 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0107.1_Ascl2_2/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCCTCTCKCTSCCCT---
---CTATCCCCGCCCTATT
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCTCKCTSCCCT
BTGACCTCTNNHTGACCY
 A C G T A C G T A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GGCCTCTCKCTSCCCT
-------CCCCCCCC-
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GGCCTCTCKCTSCCCT--
--------TTCCCCCTAC
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:forward strand
Alignment:GGCCTCTCKCTSCCCT--
---------CTGCCCGCA
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGCCTCTCKCTSCCCT
--ACTTTCACTTTC--
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCTCKCTSCCCT
TGACCTCTCNNTGACCT
 A C G T A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCTCKCTSCCCT
TGACCTTTANTTGACCT
 A C G T A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

PB0100.1_Zfp740_1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGCCTCTCKCTSCCCT----
----CCCCCCCCCCCACTTG
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GGCCTCTCKCTSCCCT--
------GCTCCGCCCMCY
 A T C G A T C G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A G T C G A C T A T G C A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T