Information for 3-CCACGTGACT (Motif 6)

G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
Reverse Opposite:
C G T A A C T G C G A T T G A C T G C A A T G C C A T G C G A T A C T G C T A G
p-value:1e-13
log p-value:-3.075e+01
Information Content per bp:1.658
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif311.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets50.3 +/- 24.9bp
Average Position of motif in Background45.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGACT
GCCACGTGACC
 A C G T G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCACGTGACT
ACCACGTGAC-
 A C G T G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CCACGTGACT
NCACGTGACN
 G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGACT
KCCACGTGAC-
 A C G T G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGACT
ATCACGTGAC-
 A C G T G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCACGTGACT
ATCACGTGAC-
 A C G T G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CCACGTGACT
NCACGTGACN
 G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CCACGTGACT
TCACGTGACC
 G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CCACGTGACT
-CACGTGDC-
 G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CCACGTGACT
-CACGTGNC-
 G A T C T G A C G C T A G T A C T A C G A C G T A C T G G C T A T G A C G C A T
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T