Information for 13-GAGTGAAAGC (Motif 21)

C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
T C A G A G T C A C G T A C G T A C G T T G A C G C T A A T G C A G C T A G T C
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.842
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif177.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets44.8 +/- 26.7bp
Average Position of motif in Background54.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAAAGC
GAAAGTGAAAGT
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAAAGC--
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGAAAGC-
TGAGTGACAGSC
 A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAGTGAAAGC-
-ACTGAAACCA
 C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAAAGC
NTGATTGACAGN
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAAAGC
GAAAGTGAAAGT
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAAAGC-----
GGAAAGCGAAACCAAAAC
 A C G T A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAAAGC
GGAAGTGAAAST
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAAAGC
GAAASYGAAASY
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAAAGC
BTGABTGACAGS
 A C G T A C G T C T A G C T G A T A C G C G A T A C T G C G T A C G T A C G T A A C T G A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C