Information for 10-GCAGTTACAT (Motif 18)

A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T
Reverse Opposite:
C G T A C G A T A T C G G A C T C G T A C T G A G T A C C G A T A C T G A G T C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif95.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets44.4 +/- 29.2bp
Average Position of motif in Background54.1 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTACAT
GGCVGTTR---
 A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTACAT
BRRCVGTTDN--
 A C G T A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAGTTACAT
TGGCAGTTGG--
 A C G T A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCAGTTACAT--
-ANGTTACATAA
 A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTACAT--
TTCATTTGCATAT
 A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGTTACAT-
--ATTTGCATA
 A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTACAT
TGGCAGTTGN--
 A C G T A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTTACAT-
BTVATTWGCATA
 A C G T A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGTTACAT--
--ATTTGCATAA
 A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAGTTACAT---
---VTTRCATAAY
 A C T G T G A C C G T A A C T G A G C T C G A T C T G A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C