Information for 10-GCGCGGAGCCAAT (Motif 15)

T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
Reverse Opposite:
T C G A A G C T G A C T C A T G A C T G A T G C A G C T A T G C T A G C A C T G T G A C A T C G A G T C
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.668
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif349.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets41.4 +/- 25.6bp
Average Position of motif in Background49.9 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GCGCGGAGCCAAT
---CGGAGC----
 T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCGCGGAGCCAAT
RGKGGGCGGAGC----
 A C G T A C G T A C G T T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCGCGGAGCCAAT
-----CAGCC---
 T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGCGGAGCCAAT
GGGGGCGGGGCC---
 A C G T A C G T T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGCGGAGCCAAT---
CCTTCGGCGCCAAAAGG
 A C G T T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGCGGAGCCAAT--
---ACTAGCCAATCA
 T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGCGGAGCCAAT---
AGCTCGGCGCCAAAAGC
 A C G T T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GCGCGGAGCCAAT---
------AGCCAATCGG
 T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCGCGGAGCCAAT
TGGCACCATGCCAA-
 A C G T A C G T T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCGCGGAGCCAAT
----CGTGCCAAG
 T C A G T A G C A C T G T G A C A C T G A T C G C T G A A T C G A G T C G T A C C T G A C T G A A G C T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G