Information for 5-NAGMTATGMTKRGCTG (Motif 16)

T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G A G T C A G T C G T C A T G C A C A G T A G T C G T C A A C G T T G C A A C T G A G T C C G A T A G C T
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 23.9bp
Average Position of motif in Background62.1 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:NAGMTATGMTKRGCTG-
-NGTCACGCTTGGCTGC
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G A C G T
A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:NAGMTATGMTKRGCTG-
--GTCATGCHTGRCTGS
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:NAGMTATGMTKRGCTG-----
--GTCACGCTTGGCTGCNCNN
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NAGMTATGMTKRGCTG
-AGATAAGA-------
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:11
Orientation:reverse strand
Alignment:NAGMTATGMTKRGCTG
-----------NGCTN
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-NAGMTATGMTKRGCTG
NVAGATAAGR-------
 A C G T T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--NAGMTATGMTKRGCTG
NNGAGATAAGA-------
 A C G T A C G T T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----NAGMTATGMTKRGCTG
TATAGAGATAAGAATTG---
 A C G T A C G T A C G T A C G T T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:NAGMTATGMTKRGCTG
NAGATAAGNN------
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:NAGMTATGMTKRGCTG
CAGATAAGGN------
 T C G A C G T A C T A G G T A C A C G T G T C A C A G T T C A G G T C A A C G T A C G T C T A G A C T G A G T C A G C T A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T