Information for 9-GGACTGAGTTGAT (Motif 9)

A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
Reverse Opposite:
G T C A A G C T A G T C T C G A C G T A A T G C A G C T A G T C G T C A A C T G G A C T A G T C G T A C
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.828
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 20.3bp
Average Position of motif in Background35.1 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGACTGAGTTGAT
---TTRAGTGSYK
 A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGACTGAGTTGAT
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGACTGAGTTGAT
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGACTGAGTTGAT---
GGACTGAATTCATGCC
 A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GGACTGAGTTGAT
-------GTGGAT
 A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGACTGAGTTGAT-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GGACTGAGTTGAT
AGGAAACAGCTG--
 A C G T A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GGACTGAGTTGAT------
----NNATNTGATANNNNN
 A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GGACTGAGTTGAT
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GGACTGAGTTGAT--
-----TAATTGATTA
 A C T G A C T G C T G A G T A C C A G T C T A G C T G A A T C G A C G T A G C T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A