Information for 16-TTTCAAAGGAACA (Motif 19)

A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
Reverse Opposite:
A C G T A C T G A G C T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C T G A C T G A
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 34.1bp
Average Position of motif in Background27.9 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTCAAAGGAACA
ACATCAAAGG----
 A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTTCAAAGGAACA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTTCAAAGGAACA
CGGTTTCAAA------
 A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTTCAAAGGAACA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTCAAAGGAACA
-TTCTNMGGAA--
 A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTCAAAGGAACA
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTCAAAGGAACA
ACWTCAAAGG----
 A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAAAGGAACA-
ANTTCTCAGGAANNN
 A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTCAAAGGAACA
ANTTCTNNAGAA--
 A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTCAAAGGAACA
ACATCAAAGGNA--
 A C G T A G C T A G C T A C G T A G T C C G T A C G T A C G T A A C T G A T C G C G T A C T G A A G T C G T C A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T