Information for 4-GAHTGGHCAGAAAGAG (Motif 12)

A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T G T A C A C G T A G C T A C G T A T G C A C G T A C T G C A G T G T A C A T G C C G T A C A T G A C G T A G T C
p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.829
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 17.9bp
Average Position of motif in Background62.8 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GAHTGGHCAGAAAGAG
--------ACAAAG--
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAHTGGHCAGAAAGAG-
-----KCCAAAAATAGC
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAHTGGHCAGAAAGAG-
-----DCYAAAAATAGM
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAHTGGHCAGAAAGAG--
---ATGCTAAAAATAGAA
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAHTGGHCAGAAAGAG
-----VRRACAAWGG-
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GAHTGGHCAGAAAGAG----
--------ACAAAGGNBCCT
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAHTGGHCAGAAAGAG
AAAATGTAAACAAACAG
 A C G T A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAHTGGHCAGAAAGAG
AAAATGTAAACAAACAG
 A C G T A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GAHTGGHCAGAAAGAG-
-----GCTAAAAATAGC
 A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAHTGGHCAGAAAGAG
TGATTGGCTANN-----
 A C G T A C T G G T C A G A T C A C G T A T C G C A T G G C T A A G T C C G T A A T C G C G T A C T G A C G T A A C T G C G T A A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T