Information for 7-CCCACAATGC (Motif 9)

G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
Reverse Opposite:
T A C G A G T C G C T A G C A T G C A T A C T G G A C T A C T G T A C G C A T G
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.657
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif440.6
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets56.6 +/- 24.9bp
Average Position of motif in Background51.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CCCACAATGC----
TACCCACAATGCATTG
 A C G T A C G T G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CCCACAATGC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCCACAATGC-
--GACAATGNN
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCACAATGC
VRRACAAWGG
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCCACAATGC
---ACAAAG-
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCACAATGC---
CTCACACAATGGCGC
 A C G T A C G T G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCACAATGC
VRAACAATGG
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCCACAATGC
RNAACAATGG
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCCACAATGC-----
---ACAAAGGNBCCT
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCACAATGC
--RACAAWGG
 G T A C A T G C T G A C C T G A T G A C C G T A C G T A C G A T C T A G A T G C
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G