Information for 14-VATAGTGAGA (Motif 25)

T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A
Reverse Opposite:
C G A T T G A C C G A T G T A C C T G A A G T C A C G T T G C A A G C T A C G T
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.684
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif64.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.1 +/- 23.3bp
Average Position of motif in Background50.9 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:VATAGTGAGA--
GAAAGTGAAAGT
 T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-VATAGTGAGA----
AGAAAGTGAAAGTGA
 A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----VATAGTGAGA-
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-VATAGTGAGA-------
GGAAAGCGAAACCAAAAC
 A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---VATAGTGAGA----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:VATAGTGAGA--
GAAAGTGAAAGT
 T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--VATAGTGAGA--
CTAATATTGCTAAA
 A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--VATAGTGAGA--
CTAATATTGCTAAA
 A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----VATAGTGAGA---
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----VATAGTGAGA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T T G C A C T G A A C G T C G T A C T A G G A C T C A T G G C T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A