Information for 8-GGTADTAATCCTTTCC (Motif 20)

A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
Reverse Opposite:
A C T G C T A G C T G A C G T A C G T A A T C G C T A G C T G A A G C T A G C T C G T A G A T C A C G T C G T A A G T C G T A C
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.781
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 20.5bp
Average Position of motif in Background52.2 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTADTAATCCTTTCC
NNNAATTAATCCCCNCN
 A C G T A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTADTAATCCTTTCC
GNNNATTAATCCCTNCN
 A C G T A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTADTAATCCTTTCC-
NNNATTAATCCGNTTNA
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTADTAATCCTTTCC-
NNNATTAATCCGNTTNA
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTADTAATCCTTTCC
GANNATTAATCCCTNNN
 A C G T A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGTADTAATCCTTTCC
----TTAATCCT----
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTADTAATCCTTTCC
---NYTAATCCYB---
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTADTAATCCTTTCC
----TTAATCCC----
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGTADTAATCCTTTCC
-----TAATCCCN---
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTADTAATCCTTTCC
----CTAATCCTCTT-
 A C T G C T A G C G A T C G T A C A T G A C G T C T G A C T G A A G C T A G T C A T G C C G A T C G A T A G C T A G T C A G T C
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T