Information for 2-HRTGACGTMA (Motif 2)

G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A
Reverse Opposite:
A G C T A C T G C T G A A G T C C T A G A G C T G T A C T C G A A G C T C T G A
p-value:1e-33
log p-value:-7.755e+01
Information Content per bp:1.626
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif524.0
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets48.0 +/- 22.9bp
Average Position of motif in Background49.6 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.93
Offset:2
Orientation:forward strand
Alignment:HRTGACGTMA
--TGACGTCA
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:HRTGACGTMA
GATGACGTCA
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

Crem/MA0609.1/Jaspar

Match Rank:3
Score:0.91
Offset:0
Orientation:forward strand
Alignment:HRTGACGTMA
TATGACGTAA
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.90
Offset:1
Orientation:forward strand
Alignment:HRTGACGTMA
-ATGACGTA-
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--HRTGACGTMA----
ACGATGACGTCATCGA
 A C G T A C G T G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Creb5/MA0840.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:HRTGACGTMA--
AATGACGTCACC
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C

ATF7/MA0834.1/Jaspar

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-HRTGACGTMA---
CGATGACGTCATCG
 A C G T G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T A C G T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:HRTGACGTMA---
-RTGACGTCAYCN
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:9
Score:0.87
Offset:0
Orientation:forward strand
Alignment:HRTGACGTMA--
GATGACGTCATC
 G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--HRTGACGTMA----
NCGATGACGTCATCGN
 A C G T A C G T G A C T T C G A A G C T A C T G C T G A A G T C C T A G A G C T T G A C T C G A A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G