Information for 15-CTGKAASSATTTT (Motif 19)

A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C G T A T C G T A C G A G C T A C G T G T A C A G T C C G T A C T A G
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.885
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.0 +/- 22.1bp
Average Position of motif in Background40.0 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGKAASSATTTT---
TNCNNAACAATTTTTNC
 A C G T A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGKAASSATTTT--
-ATTATCGATTTTTT
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGKAASSATTTT--
-ANTATCGATTTTTN
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGKAASSATTTT
NNCNNAACAATTNT
 A C G T A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGKAASSATTTT--
-NTTATTGATTTTTT
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGKAASSATTTT-
ACATCTGGWWTYAATTAR
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGKAASSATTTT--
AAGTCAGCANTTTTN
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGKAASSATTTT-
--GCNGCCATCTTG
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGKAASSATTTT--
TTAAGAACAATAAATT
 A C G T A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTGKAASSATTTT--
----AAGGATATNTN
 A G T C A C G T C T A G A C T G C G T A C T G A A T C G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T