Information for 10-TAGCGACGGT (Motif 12)

A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T
Reverse Opposite:
T C G A T A G C G A T C C T A G A C G T G T A C A C T G A T G C A G C T T C G A
p-value:1e-11
log p-value:-2.755e+01
Information Content per bp:1.666
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif1046.6
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets52.4 +/- 26.3bp
Average Position of motif in Background48.7 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGGT
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGACGGT
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGGT
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGACGGT----
TNNTGCTACTGTNNNN
 A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGACGGT----
CNNNGCTACTGTANNN
 A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------TAGCGACGGT----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGCGACGGT
SCCTAGCAACAG-
 A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGGT--
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGACGGT------
NNANTAACGGTTNNNAN
 A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGACGGT------
NNNNTAACGGTTNNNAN
 A C G T A G C T T C G A T A C G T G A C C A T G T G C A G A T C C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T