Information for 5-AYGGCCGGTAGGAGGC (Motif 7)

G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G A T A G T C A T G C A C G T C G T A A G T C G T A C A C T G A T C G A G T C A G T C C T A G C A G T
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.799
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.1 +/- 19.9bp
Average Position of motif in Background58.6 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AYGGCCGGTAGGAGGC----
-TGGCCACCAGGGGGCGCTA
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC-------
---GCCASCAGGGGGCGCYVNNG
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC-----
-TGGCCACCAGGTGGCACTNT
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC-
-----SDGCAGGTGCNS
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AYGGCCGGTAGGAGGC----
--GGAAGGAAGGAAGGAAGG
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC-
--DCHCAGCAGGRGGCC
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AYGGCCGGTAGGAGGC
CWGGCGGGAA------
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC
---NCCGGAAGTGG--
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C
A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AYGGCCGGTAGGAGGC
---RCCGGAAGTD---
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C
A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AYGGCCGGTAGGAGGC
-GGGCGGGAAGG----
 G C T A A G C T A C T G A C T G A T G C G T A C A C T G A C T G G A C T C G T A A T C G A C T G C G T A A C T G A C T G A T G C
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T